CDS

Accession Number TCMCG057C20972
gbkey CDS
Protein Id XP_018482254.1
Location complement(join(41425221..41425626,41425957..41426330))
Gene LOC108853327
GeneID 108853327
Organism Raphanus sativus

Protein

Length 259aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018626752.1
Definition PREDICTED: AT-hook motif nuclear-localized protein 16-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category K
Description Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003680        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010208        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010528        [VIEW IN EMBL-EBI]
GO:0010529        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0010639        [VIEW IN EMBL-EBI]
GO:0010927        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030198        [VIEW IN EMBL-EBI]
GO:0031056        [VIEW IN EMBL-EBI]
GO:0031057        [VIEW IN EMBL-EBI]
GO:0031058        [VIEW IN EMBL-EBI]
GO:0031060        [VIEW IN EMBL-EBI]
GO:0031062        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031400        [VIEW IN EMBL-EBI]
GO:0031401        [VIEW IN EMBL-EBI]
GO:0031490        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0035065        [VIEW IN EMBL-EBI]
GO:0035067        [VIEW IN EMBL-EBI]
GO:0043062        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045229        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051129        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051570        [VIEW IN EMBL-EBI]
GO:0051574        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0085029        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1900109        [VIEW IN EMBL-EBI]
GO:1900111        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901983        [VIEW IN EMBL-EBI]
GO:1901984        [VIEW IN EMBL-EBI]
GO:1902275        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1905268        [VIEW IN EMBL-EBI]
GO:1905269        [VIEW IN EMBL-EBI]
GO:1990837        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000756        [VIEW IN EMBL-EBI]
GO:2000757        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]
GO:2001251        [VIEW IN EMBL-EBI]
GO:2001252        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGGAGGAAATATGGCTCTAACTCCAACCTTTGTAGGATCTAAGTCAATGCCAATTAGAAACCATGAAGCAGCAGAGAGAGCCAATAACAACAACAACCTGAGAGCGTTACCAAAACCGGTTCAACCAGTTTCATCAGTCGAAGGAGAGATGGCTAAAAGGCCAAGAGGTAGACCAGCTGGCTCCAAGAACAAACCAAAACCACCAATCATTGTGACTGAAGATAGTCCAAACTCCCTCAGAGCTCATGCCCTTGAGATCAACTCAGGTAACGACATATATGAGACTTTATCAGATTTTGCTAGAAGGAAACAAAGAGGACTCTGCATACTTAGTGCCAATGGTTGCGTCACCAATGTGACATTAAGACTACAGCCAGCTTCATCAGGAGCTATTGTGACATTACATGGACGTTTTGAAATCCTCTCATTCTTTGGTTCAATCTTGCCTCCGCCAGCACTGCTTGGTATAATTGGTATGACCATTTACTTAGCCCGGCCTCAAGGACAGGTTGTTGGTGGTGGACTTGTTGGTGGGCTAATATCATCTGGACCTGTTGTTATCATGGCTGCATCTTTCATGAATTCTGTGTTTGATCGTCTTCCTCTAGATGATGATGAAGTTGCTTCTATGCAGAACCAGCAGTACTATCATAATGCAAGACTACGTCCTTTAGATGACATTCATGGATTGCCTCAAAACCTGATCACTAATGGAATCTCTGGCTCTGATATTTACTCTTGGGGTCCTGCACAGCGTGCTATGTCCAAACCTTAA
Protein:  
MAGGNMALTPTFVGSKSMPIRNHEAAERANNNNNLRALPKPVQPVSSVEGEMAKRPRGRPAGSKNKPKPPIIVTEDSPNSLRAHALEINSGNDIYETLSDFARRKQRGLCILSANGCVTNVTLRLQPASSGAIVTLHGRFEILSFFGSILPPPALLGIIGMTIYLARPQGQVVGGGLVGGLISSGPVVIMAASFMNSVFDRLPLDDDEVASMQNQQYYHNARLRPLDDIHGLPQNLITNGISGSDIYSWGPAQRAMSKP